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Recent Publications from the Physical Research Interest Group

Detecting RNA base methylations in single cells by in situ hybridization.
RT Ranasinghe, MR Challand, KA Ganzinger, BW Lewis, C Softley, WH Schmied, MH Horrocks, N Shivji, JW Chin, J Spencer, D Klenerman
– Nature Communications
(2018)
9,
655
Gaussian approximation potential modeling of lithium intercalation in carbon nanostructures
S Fujikake, VL Deringer, TH Lee, M Krynski, SR Elliott, G Csányi
– Journal of Chemical Physics
(2018)
148,
Single-Molecule Light-Sheet Imaging of Suspended T Cells
SF Lee
– Biophysical Journal
(2018)
Anharmonic acoustic effects during DNA hybridization on an electrochemical quartz crystal resonator
S Swarbrick, I Efimov, VP Ostanin, D Klenerman, A Stolzing, SK Ghosh
– Electrochimica Acta
(2018)
269,
526
Water-Dispersible Polydopamine-Coated Nanofibers for Stimulation of Neuronal Growth and Adhesion.
S Sieste, T Mack, CV Synatschke, C Schilling, C Meyer Zu Reckendorf, L Pendi, S Harvey, FS Ruggeri, TPJ Knowles, C Meier, DYW Ng, T Weil, B Knöll
– Adv Healthc Mater
(2018)
e1701485
Measurement of Tau Filament Fragmentation Provides Insights into Prion-like Spreading.
F Kundel, L Hong, B Falcon, WA McEwan, TCT Michaels, G Meisl, N Esteras, AY Abramov, TJP Knowles, M Goedert, D Klenerman
– ACS Chem Neurosci
(2018)
A new processing scheme for ultra-high resolution direct infusion mass spectrometry data
AT Zielinski, I Kourtchev, C Bortolini, SJ Fuller, C Giorio, OAM Popoola, S Bogialli, A Tapparo, RL Jones, M Kalberer
– Atmospheric Environment
(2018)
178,
129
Distinct thermodynamic signatures of oligomer generation in the aggregation of the amyloid-β peptide
SIA Cohen, R Cukalevski, TCT Michaels, A Šarić, M Törnquist, M Vendruscolo, CM Dobson, AK Buell, TPJ Knowles, S Linse
– Nature Chemistry
(2018)
1
Understanding the thermal properties of amorphous solids using machine-learning-based interatomic potentials
GC Sosso, VL Deringer, SR Elliott, G Csányi
– Molecular Simulation
(2018)
1
Diophantine Approach to the Classification of Two-Dimensional Lattices: Surfaces of Face-Centered Cubic Materials.
SJ Jenkins
– Langmuir
(2018)
34,
4095
The Quadrennial Ozone Symposium 2016 (vol 34, pg 368, 2017)
S Godin-Beekmann, I Petropavlovskikh, S Reis, P Newman, W Steinbrecht, M Rex, ML Santee, RS Eckman, X Zheng, MB Tully, DS Stevenson, P Young, J Pyle, M Weber, J Tamminen, G Mills, AF Bais, C Heaviside, C Zerefos
– Advances in Atmospheric Sciences
(2018)
35,
368
Prospects for reconstructing paleoenvironmental conditions from organic compounds in polar snow and ice
C Giorio, N Kehrwald, C Barbante, M Kalberer, ACF King, ER Thomas, EW Wolff, P Zennaro
– Quaternary Science Reviews
(2018)
183,
1
Capturing resting T cells: the perils of PLL
AM Santos, A Ponjavic, M Fritzsche, RA Fernandes, JB de la Serna, MJ Wilcock, F Schneider, I Urbančič, J McColl, C Anzilotti, KA Ganzinger, M Aßmann, D Depoil, RJ Cornall, ML Dustin, D Klenerman, SJ Davis, C Eggeling, SF Lee
– Nature Immunology
(2018)
19,
203
Chemical Kinetics for Bridging Molecular Mechanisms and Macroscopic Measurements of Amyloid Fibril Formation.
TCT Michaels, A Šarić, J Habchi, S Chia, G Meisl, M Vendruscolo, CM Dobson, TPJ Knowles
– Annu Rev Phys Chem
(2018)
Chemical and climatic drivers of radiative forcing due to changes in stratospheric and tropospheric ozone over the 21st century
A Banerjee, AC Maycock, JA Pyle
– Atmospheric Chemistry and Physics
(2018)
18,
2899
Real-Time Intrinsic Fluorescence Visualization and Sizing of Proteins and Protein Complexes in Microfluidic Devices.
PK Challa, Q Peter, MA Wright, Y Zhang, KL Saar, JA Carozza, JLP Benesch, TPJ Knowles
– Anal Chem
(2018)
90,
3849
Maximizing the field of view and accuracy in 3D Single Molecule Localization Microscopy
SA Rehman, AR Carr, MO Lenz, SF Lee, K O'Holleran
– Opt Express
(2018)
26,
4631
Shedding light on aberrant interactions - a review of modern tools for studying protein aggregates
F Kundel, L Tosatto, DR Whiten, DC Wirthensohn, MH Horrocks, D Klenerman
– The FEBS journal
(2018)
TEMPORARY REMOVAL: Massively parallel C. elegans tracking provides multi-dimensional fingerprints for phenotypic discovery.
M Perni, PK Challa, JB Kirkegaard, R Limbocker, M Koopman, MC Hardenberg, P Sormanni, T Müller, KL Saar, LWY Roode, J Habchi, G Vecchi, NW Fernando, S Casford, EAA Nollen, M Vendruscolo, CM Dobson, TPJ Knowles
– J Neurosci Methods
(2018)
Bifunctional fluorescent probes for detection of amyloid aggregates and reactive oxygen species
L-M Needham, J Weber, JWB Fyfe, OM Kabia, DT Do, E Klimont, Y Zhang, M Rodrigues, CM Dobson, S Ghandi, SE Bohndiek, TN Snaddon, SF Lee
– Royal Society open science
(2018)
5,
171399