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Yusuf Hamied Department of Chemistry

 

Publications by Professor Daan Frenkel ForMemRS

A review of immune amplification via ligand clustering by self-assembled liquid-crystalline DNA complexes
EY Lee, CK Lee, NW Schmidt, F Jin, R Lande, T Curk, D Frenkel, J Dobnikar, M Gilliet, GCL Wong
– Adv Colloid Interface Sci
(2016)
232,
17
(DOI: 10.1016/j.cis.2016.02.003)
Self-Assembly of Structures with Addressable Complexity
WM Jacobs, D Frenkel
– Journal of the American Chemical Society
(2016)
138,
2457
(DOI: 10.1021/jacs.5b11918)
Consistent Treatment of Hydrophobicity in Protein Lattice Models Accounts for Cold Denaturation
E van Dijk, P Varilly, TPJ Knowles, D Frenkel, S Abeln
– Physical review letters
(2016)
116,
078101
(DOI: 10.1103/PhysRevLett.116.078101)
Theory and simulation of DNA-coated colloids: A guide for rational design
S Angioletti-Uberti, BM Mognetti, D Frenkel
– Phys Chem Chem Phys
(2016)
18,
6373
(DOI: 10.1039/c5cp06981e)
Turning intractable counting into sampling: Computing the configurational entropy of three-dimensional jammed packings
S Martiniani, KJ Schrenk, JD Stevenson, DJ Wales, D Frenkel
– Physical Review E
(2016)
93,
012906
(DOI: 10.1103/physreve.93.012906)
Modeling and Theory: general discussion.
G Kumaraswamy, VN Manoharan, J Singh, N Bachhar, S Kulkarni, R Bandyopadhyay, S Punnathanam, A Srivastav, P Roy Chowdhury, D Frenkel, GVP Kumar, V Sridurai, D Dhabal, E Eiser, M Tripathy, A Edwards, BLV Prasad, MG Basavaraj, HOS Yadav, L Walker, S Kumar, C Chakravarty, V Shinde, R Bandyopadhyaya, J Jestin, M Laradji, S Kantorovich, N Kotov, O Gang, S Kumar, R Botet, HB Kolli, YM Joshi, PA Sánchez
– Faraday Discussions
(2016)
186,
371
(DOI: 10.1039/c6fd90002j)
Nanocomposites: General discussion
G Kumaraswamy, S Kumar, S Kulkarni, A Srivastav, P Roy Chowdhury, GV Pavan Kumar, E Eiser, A Edwards, BLV Prasad, MG Basavaraj, N Shetti, M Bockstaller, H Medhi, YM Joshi, NS John, C Chakravarty, V Shinde, R Bandyopadhyaya, N Kotov, R Krishnamoorti, M Couty, J Jestin, D Frenkel
– Faraday Discuss
(2016)
186,
277
(DOI: 10.1039/c6fd90003h)
Applications to Soft Matter: general discussion.
VN Manoharan, G Kumaraswamy, MG Basavaraj, S Kumar, S Kulkarni, R Bandyopadhyay, S Punnathanam, A Srivastav, L Gonzalez-Garcia, GVP Kumar, D Frenkel, R Poojari, P Roy Chowdhury, G Shrivastav, M Tripathy, V Sridurai, A Edwards, M Som, BLV Prasad, L Walker, NS John, Y Ju-Nam, YM Joshi, N Bachhar, C Chakravarty, R Bandyopadhyaya, Z Shireen, N Kotov, O Gang, A Karim, M Tagliazucchi, E Eiser, A Tao
– Faraday Discuss
(2016)
186,
503
(DOI: 10.1039/C6FD90005D)
Synthesis of Nanoparticle Assemblies: general discussion.
M Som, S Majumdar, N Bachhar, G Kumaraswamy, GV Pavan Kumar, VN Manoharan, S Kumar, MG Basavaraj, S Kulkarni, R Bandyopadhyay, S Punnathanam, H Medhi, A Srivastav, D Frenkel, M Tripathy, E Eiser, L Gonzalez-Garcia, P Roy Chowdhury, J Singh, V Sridurai, A Edwards, BLV Prasad, AK Singh, M Bockstaller, NS John, J Seth, M Misra, C Chakravarty, V Shinde, R Bandyopadhyaya, J Jestin, R Poojari, N Kotov, O Gang, A Karim, Y Ju-Nam, S Granick, S Chervinskii, A Tao
– Faraday discussions
(2016)
186,
123
(DOI: 10.1039/C6FD90001A)
Rational design of molecularly imprinted polymers.
T Curk, J Dobnikar, D Frenkel
– Soft Matter
(2016)
12,
35
(DOI: 10.1039/c5sm02144h)
Communication: Evidence for non-ergodicity in quiescent states of periodically sheared suspensions
KJ Schrenk, D Frenkel
– The Journal of chemical physics
(2015)
143,
241103
(DOI: 10.1063/1.4938999)
The role of non-specific interactions in a patchy model of protein crystallization (vol 143, 194511, 2015)
I Staneva, D Frenkel
– Journal of Chemical Physics
(2015)
143,
229902
(DOI: 10.1063/1.4938246)
The role of non-specific interactions in a patchy model of protein crystallization.
I Staneva, D Frenkel
– The Journal of chemical physics
(2015)
143,
194511
(DOI: 10.1063/1.4935369)
Jean-Pierre Hansen - A stimulating history of simulating fluids
B Rotenberg, G Jackson, D Frenkel
– Molecular Physics
(2015)
113,
2363
(DOI: 10.1080/00268976.2015.1079971)
An enhanced version of the heat exchange algorithm with excellent energy conservation properties
P Wirnsberger, D Frenkel, C Dellago
– The Journal of Chemical Physics
(2015)
143,
124104
(DOI: 10.1063/1.4931597)
Understanding liquids: A computer game?
D Frenkel, JP Hansen
– Physics World
(2015)
9,
35
(DOI: 10.1088/2058-7058/9/4/24)
Order through disorder: entropy strikes back
D FRENKEL
– Physics World
(2015)
6,
24
(DOI: 10.1088/2058-7058/6/2/24)
Effects of co-ordination number on the nucleation behaviour in many-component self-assembly.
A Reinhardt, CP Ho, D Frenkel
– Faraday Discussions
(2015)
186,
215
(DOI: 10.1039/C5FD00135H)
Chromatin Unfolding by Epigenetic Modifications Explained by Dramatic Impairment of Internucleosome Interactions: A Multiscale Computational Study.
R Collepardo-Guevara, G Portella, M Vendruscolo, D Frenkel, T Schlick, M Orozco
– Journal of the American Chemical Society
(2015)
137,
10205
(DOI: 10.1021/jacs.5b04086)
Liquid-crystalline ordering of antimicrobial peptide-DNA complexes controls TLR9 activation.
NW Schmidt, F Jin, R Lande, T Curk, W Xian, C Lee, L Frasca, D Frenkel, J Dobnikar, M Gilliet, GCL Wong
– Nature Materials
(2015)
14,
696
(DOI: 10.1038/nmat4298)

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