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Yusuf Hamied Department of Chemistry

 

Publications by Professor Daan Frenkel ForMemRS

Out-of-equilibrium processes in suspensions of oppositely charged colloids: liquid-to-crystal nucleation and gel formation
E Sanz, C Valeriani, T Vissers, A Fortini, ME Leunissen, A van Blaaderen, D Frenkel, M Dijkstra
– Journal of Physics: Condensed Matter
(2008)
20,
494247
(DOI: 10.1088/0953-8984/20/49/494247)
Multiple occupancy crystals formed by purely repulsive soft particles
BM Mladek, P Charbonneau, CN Likos, D Frenkel, G Kahl
– Journal of Physics Condensed Matter
(2008)
20,
494245
(DOI: 10.1088/0953-8984/20/49/494245)
Homogeneous nucleation under shear in a two-dimensional Ising model: Cluster growth, coalescence, and breakup
RJ Allen, C Valeriani, S Tănase-Nicola, PR ten Wolde, D Frenkel
– Journal of Chemical Physics
(2008)
129,
134704
(DOI: 10.1063/1.2981052)
Quasibinary amorphous phase in a three-dimensional system of particles with repulsive-shoulder interactions.
YD Fomin, NV Gribova, VN Ryzhov, SM Stishov, D Frenkel
– J Chem Phys
(2008)
129,
064512
(DOI: 10.1063/1.2965880)
State-of-the-art models for the phase diagram of carbon and diamond nucleation
LM Ghiringhelli, C Valeriani, JH Los, EJ Meijer, A Fasolino, D Frenkel
– Molecular Physics
(2008)
106,
2011
(DOI: 10.1080/00268970802077884)
Dispersion of charged tracers in charged porous media
B Rotenberg, I Pagonabarraga, D Frenkel
– Epl
(2008)
83,
(DOI: 10.1209/0295-5075/83/34004)
Liquid-Vapor Transition Driven by Bond Disorder
B Bozorgui, D Frenkel
– Physical review letters
(2008)
101,
045701
(DOI: 10.1103/PhysRevLett.101.045701)
Dynamical heterogeneity in a glass-forming ideal gas.
P Charbonneau, C Das, D Frenkel
– Physical Review E Statistical Nonlinear and Soft Matter Physics
(2008)
78,
011505
(DOI: 10.1103/PhysRevE.78.011505)
Dispersion of charged tracers in charged porous media
B Rotenberg, I Pagonabarraga, D Frenkel
– EPL (Europhysics Letters)
(2008)
83,
34004
(DOI: 10.1209/0295-5075/83/34004)
Harvesting graphics power for MD simulations
JA van Meel, A Arnold, D Frenkel, SFP Zwart, RG Belleman
– Molecular Simulation
(2008)
34,
259
(DOI: 10.1080/08927020701744295)
Multi-scale simulations provide supporting evidence for the hypothesis of intramolecular protein translocation in GroEL/GroES complexes.
I Coluzza, A De Simone, F Fraternali, D Frenkel
– PLoS Computational Biology
(2008)
4,
e1000006
(DOI: 10.1371/journal.pcbi.1000006)
Irreducible finite-size effects in the surface free energy of NaCl crystals from crystal-nucleation data.
T Zykova-Timan, C Valeriani, E Sanz, D Frenkel, E Tosatti
– Physical Review Letters
(2008)
100,
036103
(DOI: 10.1103/PhysRevLett.100.036103)
Random organization - Ordered chaos
D Frenkel
– Nature Physics
(2008)
4,
345
(DOI: 10.1038/nphys973)
Phase coexistence of cluster crystals: Beyond the gibbs phase rule
BM Mladek, P Charbonneau, D Frenkel
– Physical Review Letters
(2007)
99,
235702
(DOI: 10.1103/PhysRevLett.99.235702)
Comparison of simple perturbation-theory estimates for the liquid-solid and the liquid-vapor interfacial free energies of Lennard-Jones systems
C Valeriani, ZJ Wang, D Frenkel
– Molecular Simulation
(2007)
33,
1023
(DOI: 10.1080/08927020701579352)
Unexpected relaxation dynamics of a self-avoiding polymer in cylindrical confinement.
A Arnold, B Bozorgui, D Frenkel, B-Y Ha, S Jun
– Journal of Chemical Physics
(2007)
127,
164903
(DOI: 10.1063/1.2799513)
Molecular simulations of droplet coalescence in oil/water/surfactant systems
L Rekvig, D Frenkel
– The Journal of chemical physics
(2007)
127,
134701
(DOI: 10.1063/1.2780865)
Computing stationary distributions in equilibrium and nonequilibrium systems with forward flux sampling
C Valeriani, RJ Allen, MJ Morelli, D Frenkel, P Rein ten Wolde
– J Chem Phys
(2007)
127,
114109
(DOI: 10.1063/1.2767625)
Protein shape and crowding drive domain formation and curvature in biological membranes
RN Frese, JC Pàmies, JD Olsen, S Bahatyrova, CD van der Weij-de Wit, TJ Aartsma, C Otto, CN Hunter, D Frenkel, R van Grondelle
– Biophysical journal
(2007)
94,
640
(DOI: 10.1529/biophysj.107.116913)
Local structure of liquid carbon controls diamond nucleation.
LM Ghiringhelli, C Valeriani, EJ Meijer, D Frenkel
– Physical Review Letters
(2007)
99,
055702
(DOI: 10.1103/PhysRevLett.99.055702)

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