Herchel Smith Professor of Medicinal Chemistry

Nucleic acids are fundamental to life. Our research is focused on the chemical biology of nucleic acids, and employs the principles of chemistry and the molecular sciences to address questions of importance in biology and medicine. Projects are inherently interdisciplinary and will provide scope for a diversity of intellectual and experimental approaches that include: organic synthesis, biophysics, molecular and cellular biology and genomics. Our scientific goals are problem-driven, which constantly raises the need to invent new methodology.

 

A major interest is to elucidate and manipulate mechanisms that control the expression of genes (either transcription, or translation). We are particularly interested in the role of non-canonical nucleic acid structures that control gene expression (e.g. G-quadruplexes, micro RNA and RNA structures in the 5' untranslated regions of mRNAs). Our goal is to design and synthesise small organic molecules that target such structures and alter the expression of certain genes of interest. Such small molecule gene regulators are valuable tools to study mechanisms in biology and will also open up new approaches for therapeutics and molecular medicine, particularly for diseases characterized by aberrant expression of certain genes (e.g. various cancers).

Our fundamental science will inevitably create opportunities for translation and commercialisation. One such example was our invention (with Professor David Klenerman) of new DNA sequencing technology ("Solexa sequencing") that was commercialised as a Cambridge University spinout company (now part of Illumina Inc.) and is used routinely for applications in genomics, including human genome sequencing. 

Hear Shankar Balasubramanian discuss some of the group's research.

Watch Professor Balasubramanian discuss his research

Take a tour of the Balasubramanian Lab

Publications

Recent developments in linker design and application.
AJ Wills, S Balasubramanian
Curr Opin Chem Biol
(2003)
7
From the combinatorial chemistry boom to polymer-supported parallel chemistry: Established technologies for drug discovery
Cano, M., Balasubramanian, S.
Drugs of the Future
(2003)
28
PNA and oligonucleotide inhibitors of human telomerase
S Balasubramanian, G Gavory
(2003)
Site-specific cleavage of human telomerase RNA using PNA-neocuproine•Zn(II) derivatives
A Whitney, G Gavory, S Balasubramanian
Chemical communications (Cambridge, England)
(2003)
9
Solid-phase catch, activate, and release synthesis of cyanine dyes.
SJ Mason, S Balasubramanian
Organic Letters
(2002)
4
Minimum length requirement of the alignment domain of human telomerase RNA to sustain catalytic activity in vitro.
G Gavory, M Farrow, S Balasubramanian
Nucleic Acids Res
(2002)
30
Synthesis of a Polymer-Supported Oxazolidine Aldehyde for Asymmetric Chemistry
AJ Wills, Y Krishnan-Ghosh, S Balasubramanian
J Org Chem
(2002)
67
Enhanced cooperative binding of oligonucleotides to form DNA duplexes mediated by metal ion chelation.
I Horsey, Y Krishnan-Ghosh, S Balasubramanian
Chemical communications (Cambridge, England)
(2002)
8
Solid-phase synthesis of symmetrical 3,6-bispeptide-acridone conjugates.
S Ladame, RJ Harrison, S Neidle, S Balasubramanian
Org Lett
(2002)
4
Observation of an Isotope Effect in the Chorismate Synthase Reaction
S Balasubramanian, C Abell, JR Coggins
Journal of the American Chemical Society
(2002)
112

Research Group

Research Interest Group

Telephone number

01223 336347

Email address