Research Associate
Publications
Degradation of G-quadruplex-binding proteins in chromatin using G4-ligand-based proteolysis-targeting chimeras.
Nature chemistry
(2026)
1
(doi: 10.1038/s41557-026-02111-y)
Sequencing DNA methylation and hydroxymethylation at co-occurring chromatin features.
Nat Commun
(2026)
17
2591
(doi: 10.1038/s41467-026-69429-6)
Commentary on 'Untargeted CUT&Tag reads are enriched at accessible chromatin and restrict identification of potential G4-forming sequences in G4-targeted CUT&Tag experiments'.
Nucleic acids research
(2025)
53
gkaf1337
(doi: 10.1093/nar/gkaf1337)
DeepRCI: predicting RNA-chromatin interactions via deep learning with multi-omics data
Quantitative Biology
(2023)
11
275
(doi: 10.15302/j-qb-022-0316)
Improving comparative analyses of Hi-C data via contrastive self-supervised learning
Briefings in Bioinformatics
(2023)
24
bbad193
(doi: 10.1093/bib/bbad193)
Modeling multi-species RNA modification through multi-task curriculum learning.
Nucleic Acids Research
(2021)
49
3719
(doi: 10.1093/nar/gkab124)
Characterizing RNA Pseudouridylation by Convolutional Neural Networks
Genomics Proteomics & Bioinformatics
(2021)
19
815
(doi: 10.1016/j.gpb.2019.11.015)
Integrating Hi-C and FISH data for modeling of the 3D organization of chromosomes.
Nat Commun
(2019)
10
2049
(doi: 10.1038/s41467-019-10005-6)
Analysis of Ribosome Stalling and Translation Elongation Dynamics by Deep Learning
Cell systems
(2017)
5
212
(doi: 10.1016/j.cels.2017.08.004)
