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Yusuf Hamied Department of Chemistry

 

Herchel Smith Professor of Medicinal Chemistry

Nucleic acids are fundamental to life. Our research is focused on the chemical biology of nucleic acids, and employs the principles of chemistry and the molecular sciences to address questions of importance in biology and medicine. Projects are inherently interdisciplinary and will provide scope for a diversity of intellectual and experimental approaches that include: organic synthesis, biophysics, molecular and cellular biology and genomics. Our scientific goals are problem-driven, which constantly raises the need to invent new methodology.

 

A major interest is to elucidate and manipulate mechanisms that control the expression of genes (either transcription, or translation). We are particularly interested in the role of non-canonical nucleic acid structures that control gene expression (e.g. G-quadruplexes, micro RNA and RNA structures in the 5' untranslated regions of mRNAs). Our goal is to design and synthesise small organic molecules that target such structures and alter the expression of certain genes of interest. Such small molecule gene regulators are valuable tools to study mechanisms in biology and will also open up new approaches for therapeutics and molecular medicine, particularly for diseases characterized by aberrant expression of certain genes (e.g. various cancers).

Our fundamental science will inevitably create opportunities for translation and commercialisation. One such example was our invention (with Professor David Klenerman) of new DNA sequencing technology ("Solexa sequencing") that was commercialised as a Cambridge University spinout company (now part of Illumina Inc.) and is used routinely for applications in genomics, including human genome sequencing. 

Hear Shankar Balasubramanian discuss some of the group's research.

Watch Professor Balasubramanian discuss his research

Take a tour of the Balasubramanian Lab

Publications

Use of fluorescence resonance energy transfer to investigate the conformation of DNA substrates bound to the Klenow fragment
WS Furey, CM Joyce, MA Osborne, D Klenerman, JA Peliska, S Balasubramanian
– Biochemistry
(1998)
37,
2979
Progress in Chemical Encoding for Combinatorial Synthesis
S Balasubramanian, C Barnes, RH Scott
– Recent Research Developments in Organic Chemistry
(1998)
2,
367
A Combinatorial Approach to Identifying Protein Tyrosine Phosphatase Substrates from a Phosphotyrosine Peptide Library
YW Cheung, C Abell, S Balasubramanian
– Journal of the American Chemical Society
(1997)
119,
9568
Studies on the Synthesis, Characterisation and Reactivity of Aromatic Diboronic Acids
MH Todd, S Balasubramanian, C Abell
– Tetrahedron Letters
(1997)
38,
6781
Synthesis of 2-oxindole derivatives via the intramolecular Heck reaction on solid support
V Arumugam, A Routledge, C Abell, S Balasubramanian
– Tetrahedron Letters
(1997)
38,
6473
Properties of fluorophores on solid phase resins; implications for screening, encoding and reaction monitoring
RH Scott, S Balasubramanian
– Bioorganic and Medicinal Chemistry Letters
(1997)
7,
1567
A convenient synthetic route to oligonucleotide conjugates
JG Harrison, S Balasubramanian
– Bioorganic & Medicinal Chemistry Letters
(1997)
7,
1041
The use of a dithiane protected benzoin photolabile safety catch linker for solid-phase synthesis.
A Routledge, C Abell, S Balasubramanian
– Tetrahedron Letters
(1997)
38,
1227
Solid phase reductive alkylation of secondary amines
NM Khan, V Arumugam, S Balasubramanian
– Tetrahedron Letters
(1996)
37,
4819
ESCHERICHIA-COLI CHORISMATE SYNTHASE CATALYZES THE CONVERSION OF (6S)-6-FLUORO-5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE TO 6-FLUOROCHORISMATE - IMPLICATIONS FOR THE ENZYME MECHANISM AND THE ANTIMICROBIAL ACTION OF (6S)-6-FLUOROSHIKIMATE
S Bornemann, MK Ramjee, S Balasubramanian, C Abell, JR Coggins, DJ Lowe, RN Thorneley
– J Biol Chem
(1995)
270,
22811
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Research Group

Research Interest Group

Telephone number

01223 336347

Email address

sb10031@cam.ac.uk