skip to content

Yusuf Hamied Department of Chemistry

 

Herchel Smith Professor of Medicinal Chemistry

Nucleic acids are fundamental to life. Our research is focused on the chemical biology of nucleic acids, and employs the principles of chemistry and the molecular sciences to address questions of importance in biology and medicine. Projects are inherently interdisciplinary and will provide scope for a diversity of intellectual and experimental approaches that include: organic synthesis, biophysics, molecular and cellular biology and genomics. Our scientific goals are problem-driven, which constantly raises the need to invent new methodology.

 

A major interest is to elucidate and manipulate mechanisms that control the expression of genes (either transcription, or translation). We are particularly interested in the role of non-canonical nucleic acid structures that control gene expression (e.g. G-quadruplexes, micro RNA and RNA structures in the 5' untranslated regions of mRNAs). Our goal is to design and synthesise small organic molecules that target such structures and alter the expression of certain genes of interest. Such small molecule gene regulators are valuable tools to study mechanisms in biology and will also open up new approaches for therapeutics and molecular medicine, particularly for diseases characterized by aberrant expression of certain genes (e.g. various cancers).

Our fundamental science will inevitably create opportunities for translation and commercialisation. One such example was our invention (with Professor David Klenerman) of new DNA sequencing technology ("Solexa sequencing") that was commercialised as a Cambridge University spinout company (now part of Illumina Inc.) and is used routinely for applications in genomics, including human genome sequencing. 

Hear Shankar Balasubramanian discuss some of the group's research.

Watch Professor Balasubramanian discuss his research

Take a tour of the Balasubramanian Lab

Publications

FANCJ Is a Structure-specific DNA Helicase Associated with the Maintenance of Genomic G/C Tracts
TBC London, LJ Barber, G Mosedale, GP Kelly, S Balasubramanian, ID Hickson, SJ Boulton, K Hiom
– The Journal of biological chemistry
(2008)
283,
36132
Recognition and discrimination of DNA quadruplexes by acridine-peptide conjugates
JE Redman, JM Granadino-Roldán, JA Schouten, S Ladame, AP Reszka, S Neidle, S Balasubramanian
– Org. Biomol. Chem.
(2008)
7,
76
G-quadruplexes: the beginning and end of UTRs
JL Huppert, A Bugaut, S Kumari, S Balasubramanian
– Nucleic acids research
(2008)
36,
6260
Selective recognition of a DNA G-quadruplex by an engineered antibody.
H Fernando, R Rodriguez, S Balasubramanian
– Biochemistry
(2008)
47,
9365
G-quadruplex recognition by bis-indole carboxamides
J Dash, PS Shirude, S Balasubramanian
– Chemical communications (Cambridge, England)
(2008)
3055
Single-molecule analysis of human telomerase monomer
D Alves, H Li, R Codrington, A Orte, X Ren, D Klenerman, S Balasubramanian
– Nat Chem Biol
(2008)
4,
287
Rigid cyanine dye nucleic acid labels
A Fegan, PS Shirude, S Balasubramanian
– Chemical Communications
(2008)
2004
Single molecule conformational analysis of the biologically relevant DNA G-quadruplex in the promoter of the proto-oncogene c-MYC
PS Shirude, L Ying, S Balasubramanian
– Chemical Communications
(2008)
2007
Exploring the differential recognition of DNA G-quadruplex targets by small molecules using dynamic combinatorial chemistry.
A Bugaut, K Jantos, J-L Wietor, R Rodriguez, JKM Sanders, S Balasubramanian
– Angew Chem Int Ed Engl
(2008)
47,
2677
Single molecule conformational analysis of DNA G-quadruplexes
PS Shirude, S Balasubramanian
– Biochimie
(2008)
90,
1197
  • <
  • 20 of 31
  • >

Research Group

Research Interest Group

Telephone number

01223 336347

Email address

sb10031@cam.ac.uk