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Yusuf Hamied Department of Chemistry

 

Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

STRUCTURE AND ENERGETICS OF MODEL METAL-CLUSTERS
J Uppenbrink, DJ Wales
– J. Chem. Phys.
(1992)
96,
8520-8534
SPECTROSCOPIC SIGNATURE OF FRACTAL EXCITONS
DJ Wales, GE Ewing
– \jcsft
(1992)
88,
1359-1367
Instantaneous normal mode analysis and coexistence phenomena in small clusters
DJ WALES
– Journal of the Chemical Society Faraday Transactions
(1991)
87,
2399
Calculating the rate of loss of information from chaotic time series by forecasting
DJ WALES
– Nature
(1991)
350,
485
Packing schemes for Lennard-Jones clusters of 13 to 150 atoms: Minima, transition states and rearrangement mechanisms
J UPPENBRINK, DJ WALES
– Physical Chemistry Chemical Physics
(1991)
87,
215
Stable configurations of confined cold ionic systems.
R Rafac, JP Schiffer, JS Hangst, DH Dubin, DJ Wales
– Proceedings of the National Academy of Sciences of the United States of America
(1991)
88,
483
LOCAL INTERPRETATION OF CHAOTIC DYNAMICS IN A MANY-BODY CLASSICAL HAMILTONIAN SYSTEM
DJ Wales, RS Berry
– J. Phys. B
(1991)
24,
L351-L357
Qualitative models for the NMR chemical shifts of interstitial atoms in clusters
MJ DUER, DJ WALES
– Polyhedron
(1991)
10,
1749
INSTANTANEOUS NORMAL MODE ANALYSIS AND COEXISTENCE PHENOMENA IN SMALL CLUSTERS
DJ Wales
– \jcsft
(1991)
87,
2399-2405
SKELETAL REARRANGEMENTS IN CLUSTERS - SOME NEW THEORETICAL INSIGHTS INVOLVING LIPSCOMB DIAMOND-SQUARE-DIAMOND MECHANISM
DMP MINGOS, DJ WALES
– ELECTRON DEFICIENT BORON AND CARBON CLUSTERS
(1991)
143
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Research Group

Research Interest Groups

Telephone number

01223 336354

Email address

dw34@cam.ac.uk