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Yusuf Hamied Department of Chemistry

 

Professor of Biophysics

Our research

In the last 15 years our research has been focused on the development of methods of characterising the structure, dynamics and interactions of proteins in previously inaccessible states. These methods are based on the use of experimental data, in particular from nuclear magnetic resonance spectroscopy, as structural restraints in molecular dynamics simulations. Through this approach it is possible to obtain information about a variety of protein conformations, as for example those populated during the folding process, and about protein interactions in complex environments, including those generating aggregate species that are associated with neurodegenerative disorders such as Alzheimer's and Parkinson's diseases.

Application to neurodegenerative diseases

More recently, these studies have led us to investigate the physico-chemical principles of proteins homeostasis and their application to the development of therapeutic strategies against neurodegenerative diseases. Starting from the observation that proteins are expressed in the cell at levels close to their solubility limits, we are developing approaches to prevent or delay misfolding disorders based on the enhancement of our quality control mechanisms against protein aggregation.

Watch Professor Vendruscolo discuss his research

Take a tour of the Una Finlay Laboratory in the Centre for Misfolding Diseases

Publications

Protein folding in contact map space
M Vendruscolo, R Najmanovich, E Domany
– Physical Review Letters
(1999)
82,
656
Statistical properties of contact maps
M Vendruscolo, B Subramanian, I Kanter, E Domany, J Lebowitz
– Physical Review E - Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics
(1999)
59,
977
An optimal derivation of a potential for protein folding
M Vendruscolo
– Physica A: Statistical Mechanics and its Applications
(1999)
262,
35
Pairwise contact potentials are unsuitable for protein folding
M Vendruscolo, E Domany
– The Journal of Chemical Physics
(1998)
109,
11101
High-dimensional bak-sneppen model
P De Los Rios, M Marsili, M Vendruscolo
– Physical Review Letters
(1998)
80,
5746
On the High-dimensional Bak-Sneppen model
PDL Rios, M Marsili, M Vendruscolo
(1998)
Protein stability and foldability–designability complementarity
M Vendruscolo
– Physica A: Statistical Mechanics and its Applications
(1998)
249,
576
Elusive Unfoldability: Learning a Contact Potential to Fold Crambin
M Vendruscolo, E Domany
(1998)
Efficient dynamics in the space of contact maps
M Vendruscolo, E Domany
– Folding & design
(1998)
3,
329
Protein folding in contact map space
E Domany, R Najmanovich, M Vendruscolo
– WORKSHOP ON MONTE CARLO APPROACH TO BIOPOLYMERS AND PROTEIN FOLDING
(1998)
194
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Research Interest Groups

Telephone number

01223 763873

Email address

mv245@cam.ac.uk