Professor of Biophysics

Our research

In the last 15 years our research has been focused on the development of methods of characterising the structure, dynamics and interactions of proteins in previously inaccessible states. These methods are based on the use of experimental data, in particular from nuclear magnetic resonance spectroscopy, as structural restraints in molecular dynamics simulations. Through this approach it is possible to obtain information about a variety of protein conformations, as for example those populated during the folding process, and about protein interactions in complex environments, including those generating aggregate species that are associated with neurodegenerative disorders such as Alzheimer's and Parkinson's diseases.

Application to neurodegenerative diseases

More recently, these studies have led us to investigate the physico-chemical principles of proteins homeostasis and their application to the development of therapeutic strategies against neurodegenerative diseases. Starting from the observation that proteins are expressed in the cell at levels close to their solubility limits, we are developing approaches to prevent or delay misfolding disorders based on the enhancement of our quality control mechanisms against protein aggregation.

Watch Professor Vendruscolo discuss his research

Take a tour of the Una Finlay Laboratory in the Centre for Misfolding Diseases

Publications

Determination of the folding transition states of barnase by using ΦI-value-restrained simulations validated by double mutant ΦIJ-values
X Salvatella, CM Dobson, AR Fersht, M Vendruscolo
Proceedings of the National Academy of Sciences
(2005)
102
Interpreting dynamically-averaged scalar couplings in proteins
K Lindorff-Larsen, RB Best, M Vendruscolo
Journal of Biomolecular NMR
(2005)
32
Prediction of "aggregation-prone" and "aggregation-susceptible" regions in proteins associated with neurodegenerative diseases
AP Pawar, KF Dubay, J Zurdo, F Chiti, M Vendruscolo, CM Dobson
Journal of molecular biology
(2005)
350
Detection of non-native hydrophobic interactions in the denatured state of lysozyme by molecular dynamics simulations
E Paci, M Vendruscolo
Journal of Physics Condensed Matter
(2005)
17
A glimpse at the organization of the protein universe
M Vendruscolo, CM Dobson
Proceedings of the National Academy of Sciences of the United States of America
(2005)
102
Prediction of site-specific amino acid distributions and limits of divergent (vol 22, pg 630, 2005)
M Porto, HE Roman, M Vendruscolo, U Bastolla
MOLECULAR BIOLOGY AND EVOLUTION
(2005)
22
Looking at structure, stability, and evolution of proteins through the principal eigenvector of contact matrices and hydrophobicity profiles
U Bastolla, M Porto, HE Roman, M Vendruscolo
Gene
(2005)
347
Comparison of Sequence-Based and Structure-Based Energy Functions for the Reversible Folding of a Peptide
A Cavalli, M Vendruscolo, E Paci
Biophysical journal
(2005)
88
Formation of Native and Non-native Interactions in Ensembles of Denatured ACBP Molecules from Paramagnetic Relaxation Enhancement Studies
S Kristjansdottir, K Lindorff-Larsen, W Fieber, CM Dobson, M Vendruscolo, FM Poulsen
Journal of molecular biology
(2005)
347
Simultaneous determination of protein structure and dynamics.
K Lindorff-Larsen, RB Best, MA Depristo, CM Dobson, M Vendruscolo
Nature
(2005)
433

Research Interest Groups

Telephone number

01223 763873

Email address