Professor of Chemical Physics

The self-assembly of complex mesoscopic structures, the folding of proteins, and the complicated phenomenology of glasses are all manifestations of the underlying potential energy surface (PES). In each of these fields related ideas have emerged to explain and predict chemical and physical properties in terms of the PES. In studies of clusters and glasses the PES itself is often investigated directly, whereas for proteins and other biomolecules it is also common to define free energy surfaces, as the figure below illustrates for lysozyme.

Applications of energy landscape theory in my group range from studies of tunnelling splitting patterns in small molecules to computer simulation of protein folding and misfolding, including aggregation of misfolded proteins. Other active research topics include global optimisation and investigation of how the thermodynamic and dynamic properties of glasses are related to the underlying PES.

Two recent advances are now providing new insight into larger systems. Discrete path sampling enables dynamical properties to be obtained efficiently, and is being used to calculate folding rates for proteins. Unexpected connections between dynamics and thermodynamics have also been revealed by the application of catastrophe theory to energy landscapes, and new results are now being obtained to characterize phase transitions.

Publications

Global Optimization by Basin-Hopping and the Lowest Energy Structures of Lennard-Jones Clusters Containing up to 110 Atoms
DJ Wales, JPK Doye
Journal of Physical Chemistry A
(1997)
101
Effects of three-body (Axilrod-Teller) forces on the classical and quantum behavior of rare-gas trimers
C Chakravarty, RJ Hinde, DM Leitner, DJ Wales
Physical Review E
(1997)
56
Structural predictions for (C60)N clusters with an all-atom potential
JPK Doye, A Dullweber, DJ Wales
Chemical Physics Letters
(1997)
269
Theoretical study of the water tetramer
DJ Wales, TR Walsh
The Journal of Chemical Physics
(1997)
106
Comment on “Relaxation of collective excitations in LJ-13 cluster” [J. Chem. Phys. 105, 3679 (1996)]
DJ Wales, JPK Doye
The Journal of Chemical Physics
(1997)
106
Surveying a potential energy surface by eigenvector-following - Applications to global optimisation and the structural transformations of clusters
JPK Doye, DJ Wales
Zeitschrift für Physik D Atoms, Molecules and Clusters
(1997)
40
Thermally-induced surface reconstructions of Mackay icosahedra
JPK Doye, DJ Wales
Zeitschrift für Physik D Atoms Molecules and Clusters
(1997)
40
Comparison of reaction pathways calculated by different algorithms for disilane and water trimer
TR Walsh, DJ Wales
Zeitschrift für Physik D Atoms Molecules and Clusters
(1997)
40
Fluctuation, relaxation and rearrangement dynamics of a model (H2O)20 cluster: Non-statistical dynamical behavior
A Baba, Y Hirata, S Saito, I Ohmine, DJ Wales
J. Chem. Phys.
(1997)
106
Gradient line reaction paths for hindered internal rotation in H2BNH2 and inversion in PF3
RM Minyaev, DJ Wales, TR Walsh
The Journal of Physical Chemistry A
(1997)
101

Research Group

Research Interest Groups

Telephone number

01223 336354

Email address