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Dr Max Bonomi

Publications

Sequence Specificity in the Entropy-Driven Binding of a Small Molecule and a Disordered Peptide.
GT Heller, FA Aprile, M Bonomi, C Camilloni, A De Simone, M Vendruscolo
– Journal of molecular biology
(2017)
Simultaneous quantification of protein order and disorder.
P Sormanni, D Piovesan, GT Heller, M Bonomi, P Kukic, C Camilloni, M Fuxreiter, Z Dosztanyi, RV Pappu, MM Babu, S Longhi, P Tompa, AK Dunker, VN Uversky, SCE Tosatto, M Vendruscolo
– Nature Chemical Biology
(2017)
13,
339
Principles of protein structural ensemble determination.
M Bonomi, GT Heller, C Camilloni, M Vendruscolo
– Current opinion in structural biology
(2017)
42,
106
Free energy landscapes of sodium ions bound to DMPC-cholesterol membrane surfaces at infinite dilution
J Yang, M Bonomi, C Calero, J Martí
– Physical chemistry chemical physics : PCCP
(2016)
18,
9036
Metadynamic metainference: Enhanced sampling of the metainference ensemble using metadynamics
M Bonomi, C Camilloni, M Vendruscolo
– Scientific reports
(2016)
6,
31232
Efficient Sampling of High-Dimensional Free-Energy Landscapes with Parallel Bias Metadynamics
J Pfaendtner, M Bonomi
– Journal of Chemical Theory and Computation
(2015)
11,
5062
Ligand Discovery for the Alanine-Serine-Cysteine Transporter (ASCT2, SLC1A5) from Homology Modeling and Virtual Screening.
C Colas, C Grewer, NJ Otte, A Gameiro, T Albers, K Singh, H Shere, M Bonomi, J Holst, A Schlessinger
– PLoS computational biology
(2015)
11,
e1004477
Specific Ion Binding at Phospholipid Membrane Surfaces.
J Yang, C Calero, M Bonomi, J Martí
– Journal of Chemical Theory and Computation
(2015)
11,
4495
Accuracy of current all-atom force-fields in modeling protein disordered states
F Palazzesi, MK Prakash, M Bonomi, A Barducci
– Journal of Chemical Theory and Computation
(2015)
11,
2
Tackling sampling challenges in biomolecular simulations
A Barducci, J Pfaendtner, M Bonomi
– Methods Mol Biol
(2014)
1215,
151
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Research Group

Telephone number

01223 336366 (shared)

Email address

mb2006@cam.ac.uk