Department of Chemistry

portrait of Dr Graeme Day

Dr Graeme Day

Churchill College

Groups: Day group website

Telephone: 01223 336390

E-mail: gmd27@cam.ac.uk

 


General


Structure prediction and lattice dynamics in molecular crystals

The main focus of our research is on the development and application of computational methods for understanding the structure and properties of molecular crystals, with the aim of guiding experiments towards the design and discovery of novel molecular materials.

 

Crystal structure prediction: The goal of crystal structure prediction is to be able to predict, from first principles, how a given molecule will arrange itself in a crystal; it is the packing of molecules and the various intermolecular interactions that determine many of a crystal's physical properties, such as colour, stability and compressibility. Therefore, reliable predictive computational methods could be an important tool for the rational design of materials. In our development of methods for crystal structure prediction, we are exploring the balance of many factors - packing energy vs. entropy, conformational energy vs. intermolecular interactions and thermodynamics vs. kinetics - that determine a crystal's structure.

Lattice dynamics and terahertz spectroscopy: As well as predicting how a molecule will crystallise, we are interested in improving our understanding of the lattice dynamics in molecular crystals: the whole-molecule vibrations about their equilibrium positions. One motivation for modelling the dynamics in crystals is to improve our understanding of the relative stabilities and physical properties of crystal forms. Our dynamics simulations are also aimed at characterising features observed in terahertz spectra of molecular crystals (0.1 - 6 THz = 3 - 200 cm-1). Terahertz spectroscopy is a promising tool for the monitoring of polymorphism of organic molecules because it is a direct probe of the intermolecular forces between molecules.

Selected Publications

Modular and Predictable Assembly of Porous Organic Molecular Crystals, Nature, 474, 367-371 (2011)

Powder Crystallography by Combined Crystal Structure Prediction and High-Resolution 1H Solid-State NMR Spectroscopy, Journal of the American Chemical Society, 132, 2564-2566, (2010)

Terahertz time-domain spectroscopy and the quantitative monitoring of mechanochemical cocrystal formation, Nature Materials, 6, 206 (2007)

Understanding the influence of polymorphism on phonon spectra: lattice dynamics calculations and terahertz spectroscopy of carbamazepine, Journal of Physical Chemistry B, 110, 447 (2006)

 

Research Interests


Teaching


Personal


Publications

Publications

Space group selection for crystal structure prediction of solvates
AJC Cabeza, E Pidcock, GM Day, WDS Motherwell, W Jones - CrystEngComm (2007) 9, 556
(DOI: 10.1039/b702073b)
Importance of molecular shape for the overall stability of hydrogen bond motifs in the crystal structures of various carbamazepine-type drug molecules
AJC Cabeza, GM Day, WDS Motherwell, W Jones - Crystal Growth and Design (2007) 7, 100
(DOI: 10.1021/cg060504u)
Database guided conformation selection in crystal structure prediction of alanine
TG Cooper, W Jones, WDS Motherwell, GM Day - CrystEngComm (2007) 9, 595
(DOI: 10.1039/b702136d)
Prediction and observation of isostructurality induced by solvent incorporation in multicomponent crystals
AJC Cabeza, GM Day, WDS Motherwell, W Jones - Journal of the American Chemical Society (2006) 128, 14466
(DOI: 10.1021/ja065845a)
Polymorphism of scyllo-inositol: Joining crystal structure prediction with experiment to elucidate the structures of two polymorphs
GM Day, J van de Streek, A Bonnet, JC Burley, W Jones, WDS Motherwell - Crystal Growth and Design (2006) 6, 2301
(DOI: 10.1021/cg060179a)
An experiment in crystal structure prediction by popular vote
GM Day, WDS Motherwell - Crystal Growth and Design (2006) 6, 1985
(DOI: 10.1021/cg060313r)
Amide pyramidalization in carbamazepine: A flexibility problem in crystal structure prediction?
AJC Cabeza, GM Day, WDS Motherwell, W Jones - Crystal Growth and Design (2006) 6, 1858
(DOI: 10.1021/cg0601756)
Understanding the influence of polymorphism on phonon spectra: Lattice dynamics calculations and terahertz spectroscopy of carbamazepine
GM Day, JA Zeitler, W Jones, T Rades, PF Taday - J Phys Chem B (2006) 110, 447
(DOI: 10.1021/jp055439y)
Investigating the latent polymorphism of maleic acid
GM Day, AV Trask, WDS Motherwell, W Jones - Chemical Communications (2006), 54
(DOI: 10.1039/b513442k)
A third blind test of crystal structure prediction
GM Day, WDS Motherwell, HL Ammon, SXM Boerrigter, RG Della Valle, E Venuti, A Dzyabchenko, JD Dunitz, B Schweizer, BP van Eijck, P Erk, JC Facelli, VE Bazterra, MB Ferraro, DWM Hofmann, FJJ Leusen, C Liang, CC Pantelides, PG Karamertzanis, SL Price, TC Lewis, H Nowell, A Torrisi, HA Scheraga, YA Arnautova, MU Schmidt, P Verwer - Acta Crystallogr B (2005) 61, 511
(DOI: 10.1107/S0108768105016563)

Funding


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