Department of Chemistry

portrait of Dr Graeme Day

Dr Graeme Day

Churchill College

Groups: Day group website

Telephone: 01223 336390

E-mail: gmd27@cam.ac.uk

 


General


Structure prediction and lattice dynamics in molecular crystals

The main focus of our research is on the development and application of computational methods for understanding the structure and properties of molecular crystals, with the aim of guiding experiments towards the design and discovery of novel molecular materials.

 

Crystal structure prediction: The goal of crystal structure prediction is to be able to predict, from first principles, how a given molecule will arrange itself in a crystal; it is the packing of molecules and the various intermolecular interactions that determine many of a crystal's physical properties, such as colour, stability and compressibility. Therefore, reliable predictive computational methods could be an important tool for the rational design of materials. In our development of methods for crystal structure prediction, we are exploring the balance of many factors - packing energy vs. entropy, conformational energy vs. intermolecular interactions and thermodynamics vs. kinetics - that determine a crystal's structure.

Lattice dynamics and terahertz spectroscopy: As well as predicting how a molecule will crystallise, we are interested in improving our understanding of the lattice dynamics in molecular crystals: the whole-molecule vibrations about their equilibrium positions. One motivation for modelling the dynamics in crystals is to improve our understanding of the relative stabilities and physical properties of crystal forms. Our dynamics simulations are also aimed at characterising features observed in terahertz spectra of molecular crystals (0.1 - 6 THz = 3 - 200 cm-1). Terahertz spectroscopy is a promising tool for the monitoring of polymorphism of organic molecules because it is a direct probe of the intermolecular forces between molecules.

Selected Publications

Modular and Predictable Assembly of Porous Organic Molecular Crystals, Nature, 474, 367-371 (2011)

Powder Crystallography by Combined Crystal Structure Prediction and High-Resolution 1H Solid-State NMR Spectroscopy, Journal of the American Chemical Society, 132, 2564-2566, (2010)

Terahertz time-domain spectroscopy and the quantitative monitoring of mechanochemical cocrystal formation, Nature Materials, 6, 206 (2007)

Understanding the influence of polymorphism on phonon spectra: lattice dynamics calculations and terahertz spectroscopy of carbamazepine, Journal of Physical Chemistry B, 110, 447 (2006)

 

Research Interests


Teaching


Personal


Publications

Publications

Predicting intrinsic aqueous solubility by a thermodynamic cycle
DS Palmer, A Llinas, I Morao, GM Day, JM Goodman, RC Glen, JBO Mitchell - Molecular Pharmaceutics (2008) 5, 266
(DOI: 10.1021/mp7000878)
Using terahertz time-domain-spectroscopy to follow the kinetics and mechanism of cocrystal formation
EPJ Parrott, JA Zeitler, T Friscic, GM Day, M Pepper, W Jones, LF Gladden - 2008 33RD INTERNATIONAL CONFERENCE ON INFRARED, MILLIMETER AND TERAHERTZ WAVES, VOLS 1 AND 2 (2008), 653
Towards prediction of stoichiometry in crystalline multicomponent complexes
AJ Cruz-Cabeza, GM Day, W Jones - Chemistry (2008) 14, 8830
(DOI: 10.1002/chem.200800668)
Structure calculation of an elastic hydrogel from sonication of rigid small molecule components
KM Anderson, GM Day, MJ Paterson, P Byrne, N Clarke, JW Steed - Angewandte Chemie - International Edition (2008) 47, 1058
(DOI: 10.1002/anie.200703785)
Structural diversity in imidazolidinone organocatalysts: a synchrotron and computational study
JC Burley, R Gilmour, TJ Prior, GM Day - ACTA CRYSTALLOGRAPHICA SECTION C-CRYSTAL STRUCTURE COMMUNICATIONS (2008) 64, O10
(DOI: 10.1107/S0108270107051396)
Probing solids through THz spectroscopy: Differentiation of chiral and racemic forms of isostructural and non-isostructural cocrystals
EPJ Parrott, JA Zeitler, T Friscic, M Pepper, W Jones, GM Day, LF Gladden - 2008 33RD INTERNATIONAL CONFERENCE ON INFRARED, MILLIMETER AND TERAHERTZ WAVES, VOLS 1 AND 2 (2008), 657
Modelling the effect of hydrogen positions on the lattice dynamics calculations of terahertz spectra of benzoic acid
RY Li, GM Day, EPJ Parrott, JA Zeitler, LF Gladden - 2008 33RD INTERNATIONAL CONFERENCE ON INFRARED, MILLIMETER AND TERAHERTZ WAVES, VOLS 1 AND 2 (2008), 697
Solvent inclusion in form II carbamazepine.
AJC Cabeza, GM Day, WDS Motherwell, W Jones - Chemical Communications (2007), 1600
(DOI: 10.1039/b701299c)
A strategy for predicting the crystal structures of flexible molecules: the polymorphism of phenobarbital
GM Day, WDS Motherwell, W Jones - Physical Chemistry Chemical Physics (2007) 9, 1693
(DOI: 10.1039/b612190j)
Terahertz time-domain spectroscopy and the quantitative monitoring of mechanochemical cocrystal formation.
KL Nguyen, T Friscic, GM Day, LF Gladden, W Jones - Nature Materials (2007) 6, 206
(DOI: 10.1038/nmat1848)

Funding


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